Index

A

add_checker() (mewarpx.sim_control.SimControl method) add_checkpoint() (mewarpx.diags_store.checkpoint_diagnostic.CheckPointDiagnostic method) add_diag_fn() (mewarpx.assemblies.Assembly method) add_field_diag() (mewarpx.diags_store.field_diagnostic.FieldDiagnostic method) add_particle_diag() (mewarpx.diags_store.particle_diagnostic.ParticleDiagnostic method) add_wfn() (mewarpx.emission.BaseEmitter method) Anode (class in mewarpx.assemblies)

append() (mewarpx.utils_store.appendablearray.AppendableArray method) append_injectedparticles() (mewarpx.emission.Injector method) AppendableArray (class in mewarpx.utils_store.appendablearray) ArbitraryDistributionVolumeEmitter (class in mewarpx.emission) ArbitraryEmitter2D (class in mewarpx.emission) area (mewarpx.emission.Emitter attribute) ArrayPlot (class in mewarpx.utils_store.plotting) Assembly (class in mewarpx.assemblies)

B

BaseEmitter (class in mewarpx.emission)

C

calc_Schottky_weight() (mewarpx.mwxrun.MEWarpXRun method) calculatenormal() (mewarpx.assemblies.CylinderZ method) (mewarpx.assemblies.InfCylinderY method) (mewarpx.assemblies.Rectangle method) Cathode (class in mewarpx.assemblies) cell_count (mewarpx.emission.Emitter attribute) change_testing_dirs() (in module mewarpx.utils_store.testing_util) change_to_warpxdir() (in module mewarpx.utils_store.testing_util) charge_accum_diag() (mewarpx.diags_store.flux_diagnostic.ParticleCSVDiag method) check_criteria() (mewarpx.sim_control.SimControl method) check_for_end_of_sim() (mewarpx.diags_store.particle_diagnostic.ParticleDiagnostic method) check_geom() (mewarpx.assemblies.Assembly method) (mewarpx.emission.BaseEmitter method)

check_scraping() (mewarpx.diags_store.flux_diagnostic.FluxDiagnostic method) check_timestep() (mewarpx.diags_store.diag_base.WarpXDiagnostic method) check_version() (in module mewarpx.utils_store.util) checkautobumpsize() (mewarpx.utils_store.appendablearray.AppendableArray method) checkpoint_manager() (mewarpx.diags_store.checkpoint_diagnostic.CheckPointDiagnostic method) CheckPointDiagnostic (class in mewarpx.diags_store.checkpoint_diagnostic) clean_old_checkpoints() (in module mewarpx.utils_store.init_restart_util) cleardata() (mewarpx.utils_store.appendablearray.AppendableArray method) columns_no_accumulate (mewarpx.diags_store.flux_diagnostic.ParticleCSVDiag attribute) compressdata() (mewarpx.utils_store.appendablearray.AppendableArray method) compute_npart() (mewarpx.emission.Injector static method) concat_crop_timeseries() (in module mewarpx.diags_store.timeseries) convert_vel_zhat_nhat() (mewarpx.emission.ArbitraryEmitter2D static method) CylinderZ (class in mewarpx.assemblies)

D

data() (mewarpx.utils_store.appendablearray.AppendableArray method) default_printed_qtys (mewarpx.diags_store.flux_diagnostic.FluxDiagBase attribute) default_timeseries_params (mewarpx.diags_store.timeseries.TimeseriesPlot attribute)

DIAG_DIR (mewarpx.diags_store.diag_base.WarpXDiagnostic attribute) do_post_processing() (mewarpx.diags_store.field_diagnostic.FieldDiagnostic method) (mewarpx.diags_store.particle_diagnostic.ParticleDiagnostic method)

E

emit() (mewarpx.utils_store.mwxlogging.MEHandler method) Emitter (class in mewarpx.emission) emitter (mewarpx.emission.Injector attribute)

entry() (in module mewarpx.utils_store.profileparser) eval_expression_t() (mewarpx.mwxrun.MEWarpXRun method) exit_handler() (in module mewarpx.mwxrun)

F

FIELD_DIAG_DIR (mewarpx.diags_store.field_diagnostic.FieldDiagnostic attribute) FieldDiagnostic (class in mewarpx.diags_store.field_diagnostic) fields (mewarpx.diags_store.flux_diagnostic.SurfaceFluxDiag attribute) (mewarpx.emission.Injector attribute) fields_diag() (mewarpx.diags_store.field_diagnostic.FieldDiagnostic method) filter() (mewarpx.utils_store.mwxlogging.MEFilter method)

FixedNumberInjector (class in mewarpx.emission) FLUX_DIAG_DIR (mewarpx.diags_store.flux_diagnostic.FluxDiagBase attribute) FluxCalcDataframe (class in mewarpx.diags_store.flux_diagnostic) FluxDiagBase (class in mewarpx.diags_store.flux_diagnostic) FluxDiagFromFile (class in mewarpx.diags_store.flux_diagnostic) FluxDiagnostic (class in mewarpx.diags_store.flux_diagnostic) FullProfile (class in mewarpx.utils_store.profileparser)

G

gauss_smooth() (mewarpx.diags_store.timeseries.Timeseries static method) gen_timeseries() (in module mewarpx.diags_store.flux_diagnostic) geoms (mewarpx.assemblies.CylinderZ attribute) (mewarpx.assemblies.InfCylinderY attribute) (mewarpx.assemblies.PatchyCathode attribute) (mewarpx.assemblies.Rectangle attribute) (mewarpx.assemblies.ZPlane attribute) (mewarpx.emission.ArbitraryDistributionVolumeEmitter attribute) (mewarpx.emission.ArbitraryEmitter2D attribute) (mewarpx.emission.BaseEmitter attribute) (mewarpx.emission.Emitter attribute) (mewarpx.emission.VolumeEmitter attribute) (mewarpx.emission.XGaussZSinDistributionVolumeEmitter attribute) (mewarpx.emission.XPlaneEmitter attribute) (mewarpx.emission.ZCylinderEmitter attribute) (mewarpx.emission.ZDiscEmitter attribute) (mewarpx.emission.ZPlaneEmitter attribute) (mewarpx.emission.ZPlanePatchyEmitter attribute) get_2D_field_slice() (in module mewarpx.utils_store.plotting) get_averagevalue_by_key() (mewarpx.diags_store.timeseries.Timeseries method) get_axis_idxs() (in module mewarpx.utils_store.plotting) get_domain_area() (mewarpx.mwxrun.MEWarpXRun method) get_dt() (mewarpx.mwxrun.MEWarpXRun method) get_figsize() (in module mewarpx.utils_store.plotting) get_figsize_from_warpx() (in module mewarpx.utils_store.plotting) get_fileprefix() (mewarpx.diags_store.field_diagnostic.FieldDiagnostic method) get_gathered_phi_grid() (mewarpx.mwxrun.MEWarpXRun method) get_gathered_rho_grid() (mewarpx.mwxrun.MEWarpXRun method) get_injectedparticles() (mewarpx.emission.Injector method) get_it() (mewarpx.mwxrun.MEWarpXRun method) get_max_wmargin() (in module mewarpx.utils_store.testing_util)

get_min_wmargin() (in module mewarpx.utils_store.testing_util) get_net_flux_timeseries() (mewarpx.diags_store.flux_diagnostic.FluxDiagBase method) get_newparticles() (mewarpx.emission.BaseEmitter method) get_normals() (mewarpx.emission.ArbitraryEmitter2D method) (mewarpx.emission.Emitter method) (mewarpx.emission.XPlaneEmitter method) (mewarpx.emission.ZCylinderEmitter method) (mewarpx.emission.ZDiscEmitter method) (mewarpx.emission.ZPlaneEmitter method) get_npart() (mewarpx.mwxrun.MEWarpXRun method) get_npart_species_dict() (mewarpx.mwxrun.MEWarpXRun method) get_positions() (in module mewarpx.utils_store.util) get_positions_RZ() (in module mewarpx.utils_store.util) get_sorted_checkpoints() (in module mewarpx.utils_store.init_restart_util) get_species_list() (mewarpx.diags_store.flux_diagnostic.ParticleCSVDiag method) get_t() (mewarpx.mwxrun.MEWarpXRun method) get_timeseries_by_key() (mewarpx.diags_store.timeseries.Timeseries method) get_updated_accumulators() (mewarpx.diags_store.flux_diagnostic.ParticleCSVDiag method) get_vec() (in module mewarpx.utils_store.plotting) get_vel_vector() (in module mewarpx.utils_store.util) get_velocities() (in module mewarpx.utils_store.util) get_voltage (mewarpx.utils_store.pulsing.PulseFunction attribute) getautobump() (mewarpx.utils_store.appendablearray.AppendableArray method) getvoltage() (mewarpx.assemblies.Assembly method) (mewarpx.emission.BaseEmitter method) (mewarpx.emission.Emitter method) (mewarpx.emission.VolumeEmitter method) getvoltage_e() (mewarpx.assemblies.Assembly method) (mewarpx.emission.BaseEmitter method) (mewarpx.emission.Emitter method) (mewarpx.emission.Injector method) (mewarpx.emission.VolumeEmitter method)

I

ideal_gas_density() (in module mewarpx.utils_store.util) InfCylinderY (class in mewarpx.assemblies) init_grid() (mewarpx.mwxrun.MEWarpXRun method) init_injectedparticles() (mewarpx.emission.Injector method) init_run() (mewarpx.mwxrun.MEWarpXRun method) init_timers_and_counters() (mewarpx.diags_store.diag_base.TextDiag method) init_timestep() (mewarpx.mwxrun.MEWarpXRun method) initialize_criteria() (mewarpx.sim_control.SimControl method) initialize_testingdir() (in module mewarpx.utils_store.testing_util) inject_particles() (mewarpx.emission.FixedNumberInjector method) (mewarpx.emission.PlasmaInjector method) (mewarpx.emission.ThermionicInjector method)

Injector (class in mewarpx.emission) injector_diag (mewarpx.emission.Injector attribute) InjectorFluxDiag (class in mewarpx.diags_store.flux_diagnostic) interpolate_from_grid() (in module mewarpx.utils_store.util) isinside() (mewarpx.assemblies.CylinderZ method) (mewarpx.assemblies.InfCylinderY method) (mewarpx.assemblies.Rectangle method) (mewarpx.assemblies.ZPlanePatchSet method)

J

J_RD() (in module mewarpx.utils_store.util)

K

keys() (mewarpx.diags_store.timeseries.Timeseries method)

L

linear_pulse_function() (in module mewarpx.utils_store.pulsing)

M

main() (in module mewarpx.utils_store.profileparser) MCC (class in mewarpx.mcc_wrapper) mean_smooth() (mewarpx.diags_store.timeseries.Timeseries static method) MEFilter (class in mewarpx.utils_store.mwxlogging) MEHandler (class in mewarpx.utils_store.mwxlogging) mewarpx module mewarpx.assemblies module mewarpx.diags module mewarpx.diags_store module mewarpx.diags_store.checkpoint_diagnostic module mewarpx.diags_store.diag_base module mewarpx.diags_store.field_diagnostic module mewarpx.diags_store.flux_diagnostic module mewarpx.diags_store.particle_diagnostic module mewarpx.diags_store.timeseries module mewarpx.emission module mewarpx.mcc_wrapper module mewarpx.mespecies module mewarpx.mwxrun module mewarpx.setups_store module mewarpx.sim_control module mewarpx.utils_store module mewarpx.utils_store.appendablearray module mewarpx.utils_store.init_restart_util module mewarpx.utils_store.mwxconstants module mewarpx.utils_store.mwxlogging module

mewarpx.utils_store.parallel_util module mewarpx.utils_store.plotting module mewarpx.utils_store.profileparser module mewarpx.utils_store.pulsing module mewarpx.utils_store.testing_util module mewarpx.utils_store.util module MEWarpXRun (class in mewarpx.mwxrun) mkdir_p() (in module mewarpx.utils_store.util) mod_array() (mewarpx.utils_store.plotting.ArrayPlot method) module mewarpx mewarpx.assemblies mewarpx.diags mewarpx.diags_store mewarpx.diags_store.checkpoint_diagnostic mewarpx.diags_store.diag_base mewarpx.diags_store.field_diagnostic mewarpx.diags_store.flux_diagnostic mewarpx.diags_store.particle_diagnostic mewarpx.diags_store.timeseries mewarpx.emission mewarpx.mcc_wrapper mewarpx.mespecies mewarpx.mwxrun mewarpx.setups_store mewarpx.sim_control mewarpx.utils_store mewarpx.utils_store.appendablearray mewarpx.utils_store.init_restart_util mewarpx.utils_store.mwxconstants mewarpx.utils_store.mwxlogging mewarpx.utils_store.parallel_util mewarpx.utils_store.plotting mewarpx.utils_store.profileparser mewarpx.utils_store.pulsing mewarpx.utils_store.testing_util mewarpx.utils_store.util move_particles_between_species() (mewarpx.mwxrun.MEWarpXRun method) mpiallreduce() (in module mewarpx.utils_store.parallel_util) mwx_round() (in module mewarpx.utils_store.util)

N

n_elements (mewarpx.diags_store.timeseries.Timeseries property)

P

parallelsum() (in module mewarpx.utils_store.parallel_util) param_defaults (mewarpx.utils_store.plotting.ArrayPlot attribute) parse_full_profiling_output() (mewarpx.utils_store.profileparser.FullProfile method) parse_section_of_profiling_output() (mewarpx.utils_store.profileparser.FullProfile method) PARTICLE_DIAG_DIR (mewarpx.diags_store.particle_diagnostic.ParticleDiagnostic attribute) ParticleCSVDiag (class in mewarpx.diags_store.flux_diagnostic) ParticleDiagnostic (class in mewarpx.diags_store.particle_diagnostic) PatchyCathode (class in mewarpx.assemblies) plasma_Debye_length() (in module mewarpx.utils_store.util) PlasmaInjector (class in mewarpx.emission) plot_1d() (mewarpx.utils_store.plotting.ArrayPlot method) plot_2d() (mewarpx.utils_store.plotting.ArrayPlot method)

plot_barrier_slices() (mewarpx.diags_store.field_diagnostic.FieldDiagnostic method) plot_contours() (mewarpx.emission.ArbitraryEmitter2D method) plot_field() (mewarpx.diags_store.field_diagnostic.FieldDiagnostic method) plot_fluxes() (mewarpx.diags_store.flux_diagnostic.FluxDiagBase method) plot_pulse() (in module mewarpx.utils_store.pulsing) print_fluxes() (mewarpx.diags_store.flux_diagnostic.FluxDiagBase method) print_fluxset() (mewarpx.diags_store.flux_diagnostic.FluxDiagBase method) print_performance_summary() (mewarpx.diags_store.diag_base.TextDiag method) process_field() (mewarpx.diags_store.field_diagnostic.FieldDiagnostic method) pulse_length (mewarpx.utils_store.pulsing.PulseFunction attribute) pulse_period (mewarpx.utils_store.pulsing.PulseFunction attribute) PulseFunction (class in mewarpx.utils_store.pulsing)

R

record_injectedparticles() (mewarpx.emission.Injector method) Rectangle (class in mewarpx.assemblies) recursive_update() (in module mewarpx.utils_store.util) refresh_species() (mewarpx.diags_store.flux_diagnostic.FluxDiagBase method) resample() (mewarpx.diags_store.timeseries.Timeseries method)

resetdata() (mewarpx.utils_store.appendablearray.AppendableArray method) reshape() (mewarpx.utils_store.appendablearray.AppendableArray method) return_iterable() (in module mewarpx.utils_store.util) run() (mewarpx.sim_control.SimControl method) run_restart() (in module mewarpx.utils_store.init_restart_util)

S

save() (mewarpx.diags_store.flux_diagnostic.FluxDiagBase method) scraper_diag (mewarpx.assemblies.Assembly attribute) set_array() (mewarpx.diags_store.timeseries.Timeseries method) set_phi_grid() (mewarpx.mwxrun.MEWarpXRun method) set_plot_labels() (mewarpx.utils_store.plotting.ArrayPlot method)

set_write_func() (mewarpx.sim_control.SimControl method) setautobump() (mewarpx.utils_store.appendablearray.AppendableArray method) SimControl (class in mewarpx.sim_control) slice_array() (mewarpx.utils_store.plotting.ArrayPlot method) styles (mewarpx.utils_store.plotting.ArrayPlot attribute) SurfaceFluxDiag (class in mewarpx.diags_store.flux_diagnostic)

T

t_fall (mewarpx.utils_store.pulsing.PulseFunction attribute) t_rise (mewarpx.utils_store.pulsing.PulseFunction attribute) takedata() (mewarpx.utils_store.appendablearray.AppendableArray method) test_df_in_margin() (in module mewarpx.utils_store.testing_util) test_df_vs_ref() (in module mewarpx.utils_store.testing_util)

text_diag() (mewarpx.diags_store.diag_base.TextDiag method) TextDiag (class in mewarpx.diags_store.diag_base) ThermionicInjector (class in mewarpx.emission) Timeseries (class in mewarpx.diags_store.timeseries) TimeseriesPlot (class in mewarpx.diags_store.timeseries) trigger_checkpoint() (mewarpx.sim_control.SimControl method)

U

UniformDistributionVolumeEmitter (class in mewarpx.emission) unitshape() (mewarpx.utils_store.appendablearray.AppendableArray method)

update_fullhist_dict() (mewarpx.diags_store.flux_diagnostic.FluxDiagnostic method) update_memory() (mewarpx.diags_store.diag_base.TextDiag method) update_ts_dict() (mewarpx.diags_store.flux_diagnostic.FluxDiagnostic method)

V

V_off (mewarpx.utils_store.pulsing.PulseFunction attribute) V_on (mewarpx.utils_store.pulsing.PulseFunction attribute)

volume (mewarpx.emission.VolumeEmitter attribute) VolumeEmitter (class in mewarpx.emission)

W

wait_time (mewarpx.utils_store.pulsing.PulseFunction attribute) WarpXDiagnostic (class in mewarpx.diags_store.diag_base)

write_file() (mewarpx.utils_store.profileparser.FullProfile method) write_results() (mewarpx.sim_control.SimControl method)

X

XGaussZSinDistributionVolumeEmitter (class in mewarpx.emission)

XPlaneEmitter (class in mewarpx.emission)

Z

ZCylinderEmitter (class in mewarpx.emission) ZDiscEmitter (class in mewarpx.emission) ZPlane (class in mewarpx.assemblies) ZPlaneEmitter (class in mewarpx.emission)

ZPlanePatchSet (class in mewarpx.assemblies) (class in mewarpx.emission) ZPlanePatchyEmitter (class in mewarpx.emission) ZSinDistributionVolumeEmitter (class in mewarpx.emission)